Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890876.1_cds_XP_016445574.1_40522
CDS Infomation

[gene=LOC107770755] [db_xref=GeneID:107770755] [protein=auxilin-related protein 2-like] [protein_id=XP_016445574.1] [location=join(37797..38389,40309..41974,42081..42228,42637..42734,42865..42930,43948..44037,44582..44758,45368..45406)] [gbkey=CDS]
Sequence

ATGGACGACCTCGATGTGCTGGCTCGAGACTTCGGGTTCAAACCCGCCGGAAAATCAGCT
CCGATGAGATCCGACGGTGGAGATCGCCGCACCTCTTCCGTCCGATCATCAAATTCTTCA
CCATTGTTCGATGATCCTGATAGTCTATTATACAAAGACGTCTTCACAAAATCTAGTAAT
AACAACAGTAAATACTCTTCAATGAGCGATTTCAATTACGATTCCATTTTCAAATCCAAT
TCGAATACTAACAACAACCACAATAACAACAACAAAATGTCGTCGATGCCGGTGTACGAC
AAGCCAGTGTACGACGAGGATATTTTCGATGGATTGCCAGGACTGAAGAGCAAATCGGTA
ACTGAAAAATCTGCATCCGCCGTGAGATTTGATGACGAAGTTTTTGCTAAAATGACTTCG
CCGCCGCAACCAAAGCATAAAGACGCGCACTTTGGTGATCTGCTGGGTAATTTGAAGGGG
AATGAGAAAAAGGTAACAGAACCGAAGAATAGTACGAGCAGCTCGAGTGCCAGAGAGTTT
GATGATTTGTTAGCTGGTTTTGGGAGTAGCAGCACTTCCACCACTAATAAGAGGTCATTT
ACAGAGTCCAGTCAATACTCCAAACCCGCTGGAAATCCAAATCAAAGTTCTAGTGTGCTG
GATGACCCTTTTGCAGGCTTAGGGTCAACTTCGATGGCGGCTTCATCTTCCCCAGGGGAG
TTCATGGATCCACTTGAAGAGATTGGTCATCAGCTTGGTAAATCTGGAAATGCAAAATCT
GAAGCTTCATCGGTTAGTGGAGGAGGGCTTGATGATTTAGATCCATTGAATGGTTTTAGT
AAGTCTGTCCCTCCGTTCTACCCTGCTAGGAATAATAGAGGGACGGAAGGGAACCCTCAA
AGTGCAGGATCGGGAAGGAGTGACACACAAACCTCTACTTCTAGAGAAAACATTGGAAAA
TCATCTTCTAGATCTTCTGGTAGCCGCTCACAGAAAAAGGTGCCTGGGGATAGTTTTCAG
GACTCTCCTCTGTTTGACATGCCTTCAGCTGATCCTCGGAGATCTTTTGGTCAAGCTGCT
TCCCCTCCATATGCAAGTAGCAATATTCATGAAACAAACTTTGAATCAGATGCATCCCCA
AGATCAGAGGAACCTTCTGATGATGTATGGCTTTCTGTATCGGAGATTCCTCTTTTTACA
CAACCTACAAGAGCTCCACCTCCATCACGACCGCCGCCTCTAATTCCACGGCGAAATATA
AAGTCAGATTCAAATGCAAGAAAGAAGGGTGACAGATATTCGTCTTCTTCAAGTTACAAC
CAATACTCTGAAAGTCCTAAACTTGCTCGTCCTGCAGCCAAGAGCCCTCCAATTTCACAG
TTGGATCAACTTGATGAATTTGCCATGGGTAGGTCTCCCCATAGCGTGGATGAAGGTGCA
GACATTCATTCTGGTGAAGATACGAGTGCAAACTCTGTAGCTGCTGCATCTGCAGCTGCG
ATGAAGGAGGCTATGGATAGAGCTCAGGCCAAATTTAGACACGCTAAGGAAGTTCGAGAA
AGAGAATATGCAAAGGCAGCTAAGAGTAAGGAGGCTGTAAACCTGGACAGGGAAGAACAA
GCCGTCCATGAGATGCAAGAAAAAGAACTGAGAGAAAACAAGGAGAGGTTAGAACGTGAA
CATCAACAGAGGGAAAAAGAAGAGGAAGAGAGAGCACAACAGAAACTGGAGAGGGAGAGG
GAGAGGGAGAGAGCCAGGGAGATGGAAAGAGATAGGGGTAGGCAAGCTGTAGAAAGGGCT
ACTAGGGAAGCACGTGAAAGAGCGGCAGCAGAAGCTAGAGAAAGAGCTTCTGCTGATGCT
CGTTTGAAAACCGAAAGAGCTGCTGTGGAGAAGGCTGCAGCTGAAGCTCGAGAACGGGCT
GAAAGGGCTGCGGTTCAGCGAGCACAAGCAGAAGCACGTGAAAGAGCTGCAGCAGAAGCT
AGAGACAGAGCACAAAAGGCAGCTGCTGAAGCAAGGGAAAAAGAAGCACGTGAAAAAGCT
TCAGCTGCAAAAGCTGAGGCTGAGGCAAGACGTCGAGCAGAACGAGCTGCTGTAGAAAGG
GCTGCTGCAGAGGCTCGGGAAAGGGCTGCTGCAGAGGCTCGAGAAAGAGCTGCTGCTGCT
GCAAGGATGAACCAACAAAAGAATGACGATGATCTTGAATCCTTTTTCAATATGGGTTCT
AGAGCCAACAGTGCACCAAAGACAAGAACAAGTTCTTCTGAGACTTCATTTGCTTCACAG
TTCCAGAACAAGGCAGGTCCGGAAGGGCCAAAGGCAACATTCTCATCTACCACAACCTCC
TCCAACAGGACAAAGGCATCTTCATCAACTACGAGTTTTGTTGATGATCTCTCGTCAATT
TTTGGAGCTGCCACGTCATCTGGAGATTTCCAAGATGTTGAAGGGGAAACAGAAGAAAGA
AGAAGAGCTAGACTAGAACGCCATCAACGAACGCAGGAGCGTGCGGCCAAAGCTTTGGCG
GAAAAGAATCAGCGTGACCTTCAAGTTCAGAGGGAGCAGGAAGAAAGACATAGAATCGGT
GAGACCCTAGATTTTGAAATCAAGCGGTGGGCTGCTGGGAAAGAAGGAAATCTGCGTGCA
CTGCTATCAACTCTGCAATATGTGCTTTGGCCTGAATGCGGTTGGCAGCCGGTTTCTTTG
ACGGATTTGATTACTGGTGCTTCTGTGAAGAAGGTATATAGAAAAGCGACATTGTGTATC
CATCCCGATAAGGTGCAGCAGAAAGGCGCCACCCTTCAACAGAAATATATTGCTGAGAAG
GTGTTTGACATGCTCAAGGAAGCATGGAACAAATTCAACTCAGAGGAGCTTTTCTAG

Peptide Sequence

PEP ID

XP_016445574.1
PEP Infomation

PREDICTED: auxilin-related protein 2-like [Nicotiana tabacum]
Sequence

MDDLDVLARDFGFKPAGKSAPMRSDGGDRRTSSVRSSNSSPLFDDPDSLLYKDVFTKSSN
NNSKYSSMSDFNYDSIFKSNSNTNNNHNNNNKMSSMPVYDKPVYDEDIFDGLPGLKSKSV
TEKSASAVRFDDEVFAKMTSPPQPKHKDAHFGDLLGNLKGNEKKVTEPKNSTSSSSAREF
DDLLAGFGSSSTSTTNKRSFTESSQYSKPAGNPNQSSSVLDDPFAGLGSTSMAASSSPGE
FMDPLEEIGHQLGKSGNAKSEASSVSGGGLDDLDPLNGFSKSVPPFYPARNNRGTEGNPQ
SAGSGRSDTQTSTSRENIGKSSSRSSGSRSQKKVPGDSFQDSPLFDMPSADPRRSFGQAA
SPPYASSNIHETNFESDASPRSEEPSDDVWLSVSEIPLFTQPTRAPPPSRPPPLIPRRNI
KSDSNARKKGDRYSSSSSYNQYSESPKLARPAAKSPPISQLDQLDEFAMGRSPHSVDEGA
DIHSGEDTSANSVAAASAAAMKEAMDRAQAKFRHAKEVREREYAKAAKSKEAVNLDREEQ
AVHEMQEKELRENKERLEREHQQREKEEEERAQQKLERERERERAREMERDRGRQAVERA
TREARERAAAEARERASADARLKTERAAVEKAAAEARERAERAAVQRAQAEARERAAAEA
RDRAQKAAAEAREKEAREKASAAKAEAEARRRAERAAVERAAAEARERAAAEARERAAAA
ARMNQQKNDDDLESFFNMGSRANSAPKTRTSSSETSFASQFQNKAGPEGPKATFSSTTTS
SNRTKASSSTTSFVDDLSSIFGAATSSGDFQDVEGETEERRRARLERHQRTQERAAKALA
EKNQRDLQVQREQEERHRIGETLDFEIKRWAAGKEGNLRALLSTLQYVLWPECGWQPVSL
TDLITGASVKKVYRKATLCIHPDKVQQKGATLQQKYIAEKVFDMLKEAWNKFNSEELF

Transcript Sequence

Gene sequence data has not been registered.